recipe calour

exploratory and interactive microbiome analyses based on heatmaps

Homepage:

https://biocore.github.io/calour/

Developer docs:

https://github.com/biocore/calour

License:

BSD / BSD-3-Clause

Recipe:

/calour/meta.yaml

Calour is a python package for processing, analysis and interactive exploration of microbiome (and other matrix form data), incorporating external databases.

package calour

Versions:

2020.8.6-0,  2019.5.1-0,  2018.10.1-0

Depends:

• biom-format

• docrep

• ipython

• ipywidgets

• matplotlib-base >=2.0

• numpy

• pandas

• pyqt >5

• python >=3.5

• scikit-bio >=0.5.1

• scikit-learn

• scipy

• statsmodels

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install calour

and update with:

conda update calour

or use the docker container:

docker pull quay.io/biocontainers/calour:<tag>

(see calour/tags for valid values for <tag>)

Download stats

Link to this page

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