recipe cassis

Detection of genomic rearrangement breakpoints

Homepage:

http://pbil.univ-lyon1.fr/software/Cassis/

License:

GPL3

Recipe:

/cassis/meta.yaml

The package Cassis implements methods for precise detection of genomic rearrangement breakpoints, which were described in Lemaitre et al., 2008.

package cassis

Versions:

0.0.20120106-1,  0.0.20120106-0

Depends:

• ghostscript

• lastz

• perl

• r-base

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install cassis

and update with:

conda update cassis

or use the docker container:

docker pull quay.io/biocontainers/cassis:<tag>

(see cassis/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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