recipe cd-hit

Clusters and compares protein or nucleotide sequences

Homepage

https://github.com/weizhongli/cdhit

License

GPLv2

Recipe

/cd-hit/meta.yaml

package cd-hit

(downloads) docker_cd-hit

Versions

4.8.1-2, 4.8.1-1, 4.8.1-0, 4.6.8-2, 4.6.8-1, 4.6.8-0, 4.6.6-0, 4.6.4-1, 4.6.4-0

Depends
  • libgcc-ng >=7.3.0

  • libstdcxx-ng >=7.3.0

  • openmp

  • zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install cd-hit

and update with:

conda update cd-hit

or use the docker container:

docker pull quay.io/biocontainers/cd-hit:<tag>

(see cd-hit/tags for valid values for <tag>)