recipe cdna_cupcake

cDNA_Cupcake is a miscellaneous collection of Python and R scripts used for analyzing sequencing data.

Homepage

https://github.com/Magdoll/cDNA_Cupcake

License

BSD / BSD-3-Clause-Clear

Recipe

/cdna_cupcake/meta.yaml

package cdna_cupcake

Versions

5.8-0, 5.3-1, 5.3-0

Depends

• biopython

• bx-python 0.7.3

• graphviz

• pbcore

• python >=2.7,<2.8.0a0

• r-base

• scikit-learn

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install cdna_cupcake

and update with:

conda update cdna_cupcake

or use the docker container:

docker pull quay.io/biocontainers/cdna_cupcake:<tag>

(see cdna_cupcake/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/cdna_cupcake/README.html)