recipe cellsnp-lite

Efficient genotyping bi-allelic SNPs on single cells

Homepage

https://github.com/single-cell-genetics/cellsnp-lite

License

Apache-2.0

Recipe

/cellsnp-lite/meta.yaml

package cellsnp-lite

Versions

1.2.1-0,  1.2.0-1,  1.2.0-0,  1.0.1-0,  1.0.0-1,  1.0.0-0,  0.3.1-1,  0.3.1-0

Depends

• htslib >=1.12,<1.13.0a0

• libgcc-ng >=9.4.0

• zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install cellsnp-lite

and update with:

conda update cellsnp-lite

or use the docker container:

docker pull quay.io/biocontainers/cellsnp-lite:<tag>

(see cellsnp-lite/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/cellsnp-lite/README.html)