recipe cif-tools

A suite of programs to manipulate and examine mmCIF files

Homepage:

https://github.com/PDB-REDO/cif-tools

Documentation:

https://github.com/PDB-REDO/cif-tools/tree/v1.0.12/doc

License:

BSD / BSD-2-Clause “Simplified”

Recipe:

/cif-tools/meta.yaml

The cif-tools suite of programs are tools you can use to examine and manipulate mmCIF and PDB files.

package cif-tools

(downloads) docker_cif-tools

versions:

1.0.12-0

depends libcifpp:

>=7.0.9,<8.0a0

depends libgcc:

>=13

depends libstdcxx:

>=13

depends libzlib:

>=1.3.1,<2.0a0

requirements:

additional platforms:
linux-aarch64,  osx-arm64

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install cif-tools

and update with::

   mamba update cif-tools

To create a new environment, run:

mamba create --name myenvname cif-tools

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/cif-tools:<tag>

(see `cif-tools/tags`_ for valid values for ``<tag>``)

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