- recipe clever-toolkit
The clever toolkit (CTK) is a suite of tools to analyze next-generation sequencing data and, in particular, to discover and genotype insertions and deletions from paired-end reads.
- Homepage:
- License:
GPLv3
- Recipe:
- package clever-toolkit¶
-
- Versions:
2.4-10
,2.4-9
,2.4-8
,2.4-7
,2.4-6
,2.4-5
,2.4-0
,2.3-0
,2.2.1-0
,2.4-10
,2.4-9
,2.4-8
,2.4-7
,2.4-6
,2.4-5
,2.4-0
,2.3-0
,2.2.1-0
,2.1-3
,2.0rc4-3
,2.0rc4-2
,2.0rc3-1
,2.0rc3-0
- Depends:
bcftools
>=1
bedtools
>=2.26
boost-cpp
>=1.74.0,<1.74.1.0a0
libgcc-ng
>=10.3.0
libstdcxx-ng
>=10.3.0
libzlib
>=1.2.11,<1.3.0a0
matplotlib
2.*
python
>=3.6,<3.7.0a0
python_abi
3.6.* *_cp36m
samtools
>=1
zlib
>=1.2.11,<1.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install clever-toolkit
and update with:
conda update clever-toolkit
or use the docker container:
docker pull quay.io/biocontainers/clever-toolkit:<tag>
(see clever-toolkit/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/clever-toolkit/README.html)