- recipe clinod
Command line NoD (clinod), for predicting nucleolar localization sequences.
- Homepage:
- License:
Apache License, Version 2.0 + others used internally
- Recipe:
- package clinod¶
-
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install clinod
and update with:
conda update clinod
or use the docker container:
docker pull quay.io/biocontainers/clinod:<tag>
(see clinod/tags for valid values for
<tag>
)
Notes¶
Command line NoD (clinod) is Java program which is packaged with a custom wrapper shell script. This shell wrapper is called "clinod" and is on $PATH by default. By default "-Xms512m -Xmx1g" is set in the wrapper. If you want to overwrite it you can specify these values directly after your binaries. If you have _JAVA_OPTIONS set globally this will take precedence. For example run it with "clinod -Xms512m -Xmx1g …"
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Link to this page¶
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