- recipe cnv_facets
Detect somatic copy number variants (CNV) in tumour-normal samples using next generation sequencing data
- Homepage:
- License:
MIT / MIT
- Recipe:
- package cnv_facets¶
-
- Versions:
0.16.0-1
,0.16.0-0
,0.15.0-1
,0.15.0-0
,0.14.0-1
,0.13.0-1
,0.12.1-1
,0.12.1-0
,0.12.0-0
,0.16.0-1
,0.16.0-0
,0.15.0-1
,0.15.0-0
,0.14.0-1
,0.13.0-1
,0.12.1-1
,0.12.1-0
,0.12.0-0
,v0.11.3-2
,v0.11.3-1
,v0.11.2-1
- Depends:
bcftools
>=1.9
htslib
>=1.9,<1.10.0a0
libgcc-ng
>=7.3.0
libgfortran-ng
>=7,<8.0a0
libstdcxx-ng
>=7.3.0
python
>=3.8,<3.9.0a0
r-base
>=3.6,<3.7.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install cnv_facets
and update with:
conda update cnv_facets
or use the docker container:
docker pull quay.io/biocontainers/cnv_facets:<tag>
(see cnv_facets/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/cnv_facets/README.html)