recipe coidb

A tool to obtain and maintain a database of COI metabarcode references

Homepage:

https://github.com/johnne/coidb

License:

MIT

Recipe:

/coidb/meta.yaml

package coidb

Versions:

0.4.8-0,  0.4.7-0,  0.4.6-0,  0.4.5-0,  0.4.3-0,  0.4.1-0,  0.4.0-0,  0.3.3-0

Depends:

• biopython

• importlib_resources

• pandas

• python >=3.8

• seqkit

• snakemake

• tqdm

• unzip

• vsearch

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install coidb

and update with:

conda update coidb

or use the docker container:

docker pull quay.io/biocontainers/coidb:<tag>

(see coidb/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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