recipe connor

A command-line tool to deduplicate bam files based on custom, inline barcoding.

Homepage

https://github.com/umich-brcf-bioinf/Connor

License

Apache / Apache-2.0

Recipe

/connor/meta.yaml

package connor

Versions

0.6.1-2,  0.6.1-1,  0.6.1-0,  0.6-2,  0.6-0,  0.5.1-0

Depends

• bcftools 1.3.1.*

• htslib 1.3.1.*

• pysam 0.9.1.*

• python

• samtools 1.3.1.*

• sortedcontainers

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install connor

and update with:

conda update connor

or use the docker container:

docker pull quay.io/biocontainers/connor:<tag>

(see connor/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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