recipe constax

A software for accurate taxonomic classification of environmental DNA markers

Homepage:

https://github.com/liberjul/CONSTAXv2

Documentation:

https://constax.readthedocs.io/en/latest/

License:

MIT

Recipe:

/constax/meta.yaml

package constax

Versions:

2.0.19-0,  2.0.18-0,  2.0.17-0,  2.0.16-0,  2.0.15-0,  2.0.14-0,  2.0.13-0,  2.0.12-0,  2.0.11-0, 

2.0.19-0,  2.0.18-0,  2.0.17-0,  2.0.16-0,  2.0.15-0,  2.0.14-0,  2.0.13-0,  2.0.12-0,  2.0.11-0,  2.0.10-0,  2.0.9-0,  2.0.8-1,  2.0.8-0,  2.0.7-2,  2.0.7-0,  2.0.6-0,  2.0.5-1,  2.0.5-0,  2.0.4-1,  2.0.4-0,  2.0.3-0,  2.0.1-0,  2.0.0-0

Depends:

• blast

• numpy

• pandas

• python >=3.6

• rdptools

• vsearch

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install constax

and update with:

conda update constax

or use the docker container:

docker pull quay.io/biocontainers/constax:<tag>

(see constax/tags for valid values for <tag>)

Download stats

Link to this page

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