recipe covtobed

covtobed - generate a BED file of covered regions from a BAM file

Homepage:

https://github.com/telatin/covtobed/

License:

MIT

Recipe:

/covtobed/meta.yaml

package covtobed

Versions:

1.3.5-1,  1.3.5-0,  1.3.3-0,  1.3.1-0,  1.3.0-0,  1.2.0-1,  1.2.0-0,  1.1.4-0,  1.1.2-0, 

1.3.5-1,  1.3.5-0,  1.3.3-0,  1.3.1-0,  1.3.0-0,  1.2.0-1,  1.2.0-0,  1.1.4-0,  1.1.2-0,  1.1.0-0,  1.0.1-0,  1.0.0-0,  0.6-0,  0.4-0,  0.3-0,  0.1-0

Depends:

• bamtools >=2.5.1,<2.5.2.0a0

• libgcc-ng >=10.3.0

• libstdcxx-ng >=10.3.0

• libzlib >=1.2.11,<1.3.0a0

• zlib >=1.2.11,<1.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install covtobed

and update with:

conda update covtobed

or use the docker container:

docker pull quay.io/biocontainers/covtobed:<tag>

(see covtobed/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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