recipe damageprofiler

A Java based tool to determine damage patterns on ancient DNA as a replacement for mapDamage

Homepage:

https://github.com/Integrative-Transcriptomics/DamageProfiler

License:

GPL / GPL-3.0

Recipe:

/damageprofiler/meta.yaml

package damageprofiler

Versions:

1.1-2,  1.1-1,  1.1-0,  0.5.0-0,  0.4.9-0,  0.4.8-1,  0.4.8-0,  0.4.6-2,  0.4.6-1, 

1.1-2,  1.1-1,  1.1-0,  0.5.0-0,  0.4.9-0,  0.4.8-1,  0.4.8-0,  0.4.6-2,  0.4.6-1,  0.4.5-1,  0.4.4-1,  0.4.3-1,  0.4.2-1,  0.3.11-1,  0.3.11-0

Depends:

• font-ttf-dejavu-sans-mono

• fontconfig

• openjdk >=11

• python

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install damageprofiler

and update with:

conda update damageprofiler

or use the docker container:

docker pull quay.io/biocontainers/damageprofiler:<tag>

(see damageprofiler/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/damageprofiler/README.html)