Package Recipe 'dbgraph'

recipe dbgraph

A graph-centric approach for metagenome-guided peptide identification in metaproteomics.

Homepage:: https://github.com/COL-IU/graph2pro-var/tree/master/Graph2Pro
License:: GNU General Public License
Recipe:: /dbgraph/meta.yaml

Includes program DBGraph2Pro and DBGraphPep2Pro. Creates a peptide and protein database from graph generated from nucleotide sequencing data using MEGAHIT or MetaSpades. A graph-centric approach for metagenome-guided peptide identification in metaproteomics.

package dbgraph¶

Versions:

1.0.0-0, v1.0.0-1

Depends:

libgcc-ng >=7.3.0
libstdcxx-ng >=7.3.0

Required By:

graph2pro-var

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install dbgraph

and update with:

conda update dbgraph

or use the docker container:

docker pull quay.io/biocontainers/dbgraph:<tag>

(see dbgraph/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/dbgraph/README.html)