recipe ddquint

Droplet Digital PCR Multiplex Analysis for chromosomal copy number detection

Homepage:

https://github.com/globuzzz2000/ddQuint

License:

MIT

Recipe:

/ddquint/meta.yaml

package ddquint

versions:

0.1.0-0

depends colorama:

>=0.4.4

depends hdbscan:

>=0.8.27

depends matplotlib-base:

>=3.3

depends numpy:

>=1.18

depends openpyxl:

>=3.0.5

depends pandas:

>=1.0

depends python:

>=3.10

depends scikit-learn:

>=0.24

depends scipy:

>=1.11

depends seaborn:

>=0.13

depends send2trash:

>=1.8.2

depends tqdm:

>=4.60.0

depends wxpython:

>=4.1.0

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install ddquint

and update with::

   mamba update ddquint

To create a new environment, run:

mamba create --name myenvname ddquint

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/ddquint:<tag>

(see `ddquint/tags`_ for valid values for ``<tag>``)

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Render an badge with the following MarkDown:

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