debwt

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A efficient method to construct BWT index of a given DNA sequence, especially useful for gigantic and high similar genome. DeBWT has good scalability to construct BWT in parallel computing. It is well-suited to run on multiple core servers or clusters to construct the BWT of large collections of genome sequences.

Home https://github.com/DixianZhu/deBWT
Versions 1.0.1
License Unknown
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/debwt

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install debwt

and update with:

conda update debwt

docker

A Docker container is available at https://quay.io/repository/biocontainers/debwt.