recipe deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data

Homepage

https://github.com/google/deepvariant

License

MIT

Recipe

/deepvariant/meta.yaml

package deepvariant

(downloads) docker_deepvariant

Versions
0.10.0-40.10.0-30.10.0-20.10.0-10.10.0-00.9.0-00.8.0-00.7.2-10.7.2-0

0.10.0-40.10.0-30.10.0-20.10.0-10.10.0-00.9.0-00.8.0-00.7.2-10.7.2-00.7.1-00.7.0-00.6.1-30.6.1-20.6.1-00.6.0-00.4.1-10.4.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install deepvariant

and update with:

conda update deepvariant

or use the docker container:

docker pull quay.io/biocontainers/deepvariant:<tag>

(see deepvariant/tags for valid values for <tag>)