recipe delly

Structural variant discovery by integrated paired-end and split-read analysis

Homepage

https://github.com/dellytools/delly

License

GPLv3

Recipe

/delly/meta.yaml

package delly

(downloads) docker_delly

Versions

0.8.1-2, 0.8.1-1, 0.8.1-0, 0.7.9-4, 0.7.8-4, 0.7.8-3, 0.7.8-2, 0.7.8-1, 0.7.8-0, 0.7.7-1, 0.7.6-0, 0.7.2-1, 0.7.2-0

Depends bzip2

>=1.0.6,<2.0a0

Depends htslib

>=1.9,<1.10.0a0

Depends libboost

Depends libgcc-ng

>=7.3.0

Depends libstdcxx-ng

>=7.3.0

Depends zlib

>=1.2.11,<1.3.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install delly

and update with:

conda update delly

or use the docker container:

docker pull quay.io/biocontainers/delly:<tag>

(see delly/tags for valid values for <tag>)