recipe demuxem

DemuxEM is the demultiplexing module of Pegasus, which works on cell-hashing and nucleus-hashing genomics data.

Homepage:

https://github.com/lilab-bcb/demuxEM

Documentation:

https://demuxEM.readthedocs.io

License:

BSD

Recipe:

/demuxem/meta.yaml

Links:

doi: 10.1038/s41467-019-10756-2

package demuxem

Versions:

0.1.7-1,  0.1.7-0,  0.1.6-0,  0.1.5.post1-0

Depends:

• numpy

• pandas

• pegasusio >=0.2.12

• python >=3.7

• scikit-learn

• scipy

• seaborn

Required By:

• pegasuspy

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install demuxem

and update with:

conda update demuxem

or use the docker container:

docker pull quay.io/biocontainers/demuxem:<tag>

(see demuxem/tags for valid values for <tag>)

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