recipe dfam

The Dfam database is a collection of Repetitive DNA element sequence alignments, hidden Markov models (HMMs) and matches lists for complete Eukaryote genomes

Homepage

dfam.org

License

GPL

Recipe

/dfam/meta.yaml

package dfam

Versions

3.3-0,  2.0-2,  2.0-1,  2.0-0

Depends

• hmmer

• perl

• python

• python-wget

• repeatmasker

• wget

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install dfam

and update with:

conda update dfam

or use the docker container:

docker pull quay.io/biocontainers/dfam:<tag>

(see dfam/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/dfam/README.html)