dia_umpire

downloads

DIA-Umpire is an open source Java program for computational analysis of data independent acquisition (DIA) mass spectrometry-based proteomics data. It enables untargeted peptide and protein identification and quantitation using DIA data, and also incorporates targeted extraction to reduce the number of cases of missing quantitation.

Home https://github.com/Nesvilab/DIA-Umpire
Versions 2.1.2
License Apache License, Version 2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/dia_umpire

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install dia_umpire

and update with:

conda update dia_umpire

Notes

DIA-Umpire is a Java program.

docker

A Docker container is available at https://quay.io/repository/biocontainers/dia_umpire.