recipe duet

SNP-Assisted Phased SV Detection from Low-depth Long-reads

Homepage

https://github.com/yekaizhou/duet

License

BSD / BSD-3-Clause

Recipe

/duet/meta.yaml

package duet

Versions

0.3-0,  0.2-0

Depends

• bcftools 1.8.*

• clair3 0.1.5.*

• python >=3.6

• svim 1.4.2.*

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install duet

and update with:

conda update duet

or use the docker container:

docker pull quay.io/biocontainers/duet:<tag>

(see duet/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/duet/README.html)