recipe dunovo

Du Novo: A pipeline for processing duplex sequencing data.

Homepage

https://github.com/galaxyproject/dunovo

License

GPLv2

Recipe

/dunovo/meta.yaml

package dunovo

(downloads) docker_dunovo

Versions

2.15-2, 2.15-1, 2.15-0, 2.14-0, 2.0.12-0, 2.0.9-0, 2.0.8-0, 2.0.6-0, 0.8.1-0, 0.7.6-1, 0.7.6-0, 0.7.5-0, 0.7.4-0, 0.7.1-0, 0.7-0

Depends bowtie

>=1.1.2

Depends gawk

Depends libgcc-ng

>=7.3.0

Depends mafft

7.221.*

Depends networkx

<2.0

Depends paste

Depends python

>=2.7,<2.8.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install dunovo

and update with:

conda update dunovo

or use the docker container:

docker pull quay.io/biocontainers/dunovo:<tag>

(see dunovo/tags for valid values for <tag>)