recipe elector

ELECTOR EvaLuator of Error Correction Tools for lOng Reads

Homepage:

https://github.com/kamimrcht/ELECTOR

License:

AGPL-3.0

Recipe:

/elector/meta.yaml

package elector

versions:

1.0.4-4,  1.0.4-3,  1.0.4-2,  1.0.4-1,  1.0.4-0,  1.0.3-1,  1.0.3-0,  1.0.2-2,  1.0.2-1, 

1.0.4-4,  1.0.4-3,  1.0.4-2,  1.0.4-1,  1.0.4-0,  1.0.3-1,  1.0.3-0,  1.0.2-2,  1.0.2-1,  1.0.2-0,  1.0.1-1,  1.0.1-0

depends _openmp_mutex:

>=4.5

depends biopython:

depends libgcc-ng:

>=12

depends libstdcxx-ng:

>=12

depends minimap2:

depends python:

>=3.10,<3.11.0a0

depends python_abi:

3.10.* *_cp310

depends samtools:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install elector

and update with::

   mamba update elector

To create a new environment, run:

mamba create --name myenvname elector

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/elector:<tag>

(see `elector/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/elector/README.html)