recipe emboss

The European Molecular Biology Open Software Suite

Homepage:

http://emboss.open-bio.org/

License:

GPL

Recipe:

/emboss/meta.yaml

package emboss

(downloads) docker_emboss

versions:
6.6.0-8,  6.6.0-7,  6.6.0-6,  6.6.0-5,  6.6.0-4,  6.6.0-3,  6.6.0-2,  6.6.0-1,  6.6.0-0, 

6.6.0-8,  6.6.0-7,  6.6.0-6,  6.6.0-5,  6.6.0-4,  6.6.0-3,  6.6.0-2,  6.6.0-1,  6.6.0-0,  6.5.7-5,  6.5.7-4,  6.5.7-3,  6.5.7-2,  6.5.7-1,  6.5.7-0,  5.0.0-4,  5.0.0-3,  5.0.0-2,  5.0.0-1,  5.0.0-0

depends libgcc-ng:

>=12

depends libgd:

>=2.3.3,<2.4.0a0

depends libharu:

>=2.4.4,<2.5.0a0

depends libpng:

>=1.6.42,<1.7.0a0

depends libzlib:

>=1.2.13,<1.3.0a0

depends python_abi:

3.8.* *_cp38

depends zlib:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install emboss

and update with::

   mamba update emboss

To create a new environment, run:

mamba create --name myenvname emboss

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/emboss:<tag>

(see `emboss/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/emboss/README.html)