recipe esme

Earth System Modelling Environment (ESME) - A bundle for scientific computing packages for climate modelling with MPI support.

Homepage:

https://github.com/j34ni/bioconda-recipes

License:

BSD / BSD-3-Clause

Recipe:

/esme/meta.yaml

ESME (Earth System Modelling Environment) is a package designed to facilitate the installation and management of various scientific computing libraries with support for multiple MPI implementations (namely MPIch, OpenMPI, MVApich and ParaStationMPI). This bundle currently includes: - PnetCDF: Version 1.14.1 - HDF5: Version 1.14.6 - netCDF_C: Version 4.9.3 - netCDF_Fortran: Version 4.6.2 - ParallelIO: Version 2.6.6 - ESMF: Version 8.9.0 - OSU_Micro_Benchmarks: Version 7.5.1 - VFD_GDS: Version 1.0.2 (only for the MVAPIch version with CUDA)

package esme_

(downloads) docker_esme_

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_

and update with::

   mamba update esme_

To create a new environment, run:

mamba create --name myenvname esme_

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_:<tag>

(see `esme_/tags`_ for valid values for ``<tag>``)
package esme_esmf_

(downloads) docker_esme_esmf_

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_esmf_

and update with::

   mamba update esme_esmf_

To create a new environment, run:

mamba create --name myenvname esme_esmf_

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_esmf_:<tag>

(see `esme_esmf_/tags`_ for valid values for ``<tag>``)
package esme_hdf5_

(downloads) docker_esme_hdf5_

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_hdf5_

and update with::

   mamba update esme_hdf5_

To create a new environment, run:

mamba create --name myenvname esme_hdf5_

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_hdf5_:<tag>

(see `esme_hdf5_/tags`_ for valid values for ``<tag>``)
package esme_netcdf-c_

(downloads) docker_esme_netcdf-c_

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_netcdf-c_

and update with::

   mamba update esme_netcdf-c_

To create a new environment, run:

mamba create --name myenvname esme_netcdf-c_

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_netcdf-c_:<tag>

(see `esme_netcdf-c_/tags`_ for valid values for ``<tag>``)
package esme_netcdf-fortran_

(downloads) docker_esme_netcdf-fortran_

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_netcdf-fortran_

and update with::

   mamba update esme_netcdf-fortran_

To create a new environment, run:

mamba create --name myenvname esme_netcdf-fortran_

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_netcdf-fortran_:<tag>

(see `esme_netcdf-fortran_/tags`_ for valid values for ``<tag>``)
package esme_omb_

(downloads) docker_esme_omb_

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_omb_

and update with::

   mamba update esme_omb_

To create a new environment, run:

mamba create --name myenvname esme_omb_

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_omb_:<tag>

(see `esme_omb_/tags`_ for valid values for ``<tag>``)
package esme_pio_

(downloads) docker_esme_pio_

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_pio_

and update with::

   mamba update esme_pio_

To create a new environment, run:

mamba create --name myenvname esme_pio_

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_pio_:<tag>

(see `esme_pio_/tags`_ for valid values for ``<tag>``)
package esme_pnetcdf_

(downloads) docker_esme_pnetcdf_

versions:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install esme_pnetcdf_

and update with::

   mamba update esme_pnetcdf_

To create a new environment, run:

mamba create --name myenvname esme_pnetcdf_

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/esme_pnetcdf_:<tag>

(see `esme_pnetcdf_/tags`_ for valid values for ``<tag>``)

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