recipe expansionhunter

A tool for estimating repeat sizes

Homepage

https://github.com/Illumina/ExpansionHunter

License

Apache / Apache v2.0

Recipe

/expansionhunter/meta.yaml

package expansionhunter

Versions

3.2.2-1,  3.2.2-0,  3.2.0-0,  3.1.2-0,  3.0.1-0,  3.0.0-0,  2.0.8-1,  2.0.8-0,  2.0.6-0

Depends

• boost >=1.70.0,<1.70.1.0a0

• htslib >=1.10.2,<1.11.0a0

• icu >=64.2,<65.0a0

• libgcc-ng >=7.5.0

• libstdcxx-ng >=7.5.0

• zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install expansionhunter

and update with:

conda update expansionhunter

or use the docker container:

docker pull quay.io/biocontainers/expansionhunter:<tag>

(see expansionhunter/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/expansionhunter/README.html)