recipe extract-sv-reads

Tool for extracting splitter or discordant reads from a BAM or CRAM file.

Homepage

https://github.com/hall-lab/extract_sv_reads

License

MIT

Recipe

/extract-sv-reads/meta.yaml

package extract-sv-reads

(downloads) docker_extract-sv-reads

Versions

1.3.0-01.2.1-11.2.1-01.1.2-01.1.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install extract-sv-reads

and update with:

conda update extract-sv-reads

or use the docker container:

docker pull quay.io/biocontainers/extract-sv-reads:<tag>

(see extract-sv-reads/tags for valid values for <tag>)