- recipe extract-sv-reads
Tool for extracting splitter or discordant reads from a BAM or CRAM file.
- Homepage:
- License:
MIT
- Recipe:
- package extract-sv-reads¶
-
- Versions:
1.3.0-3
,1.3.0-2
,1.3.0-1
,1.3.0-0
,1.2.1-1
,1.2.1-0
,1.1.2-0
,1.1.0-0
- Depends:
boost-cpp
>=1.74.0,<1.74.1.0a0
htslib
>=1.9,<1.10.0a0
libgcc-ng
>=10.3.0
libstdcxx-ng
>=10.3.0
perl
>=5.32.1,<5.33.0a0 *_perl5
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install extract-sv-reads
and update with:
conda update extract-sv-reads
or use the docker container:
docker pull quay.io/biocontainers/extract-sv-reads:<tag>
(see extract-sv-reads/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/extract-sv-reads/README.html)