fastq-join

downloads

Similar to audy’s stitch program, but in C, more efficient and supports some automatic benchmarking and tuning. It uses the same “squared distance for anchored alignment” as other tools.

Home https://github.com/brwnj/fastq-join
Versions 1.3.1
License MIT
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/fastq-join

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install fastq-join

and update with:

conda update fastq-join

docker

A Docker container is available at https://quay.io/repository/biocontainers/fastq-join.