recipe fastq-scan

FASTQ summary statistics in JSON format

Homepage:

https://github.com/rpetit3/fastq-scan

License:

MIT

Recipe:

/fastq-scan/meta.yaml

package fastq-scan

Versions:

1.0.1-2,  1.0.1-1,  1.0.1-0,  1.0.0-1,  1.0.0-0,  0.4.4-1,  0.4.4-0,  0.4.3-1,  0.4.3-0, 

1.0.1-2,  1.0.1-1,  1.0.1-0,  1.0.0-1,  1.0.0-0,  0.4.4-1,  0.4.4-0,  0.4.3-1,  0.4.3-0,  0.4.2-0,  0.4.1-0,  0.4.0-0,  0.3-1,  0.3-0,  0.2-0

Depends:

• jq

• libgcc-ng >=12

• libstdcxx-ng >=12

Required By:

• bactopia-gather

• bactopia-teton

• bactopia-qc

• illumina-cleanup

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install fastq-scan

and update with:

conda update fastq-scan

or use the docker container:

docker pull quay.io/biocontainers/fastq-scan:<tag>

(see fastq-scan/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/fastq-scan/README.html)