fermikit

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FermiKit is a de novo assembly based variant calling pipeline for deep Illumina resequencing data.

Home https://github.com/lh3/fermikit
Versions 0.14.dev1
License Unknown
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/fermikit

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install fermikit

and update with:

conda update fermikit

docker

A Docker container is available at https://quay.io/repository/biocontainers/fermikit.