recipe flye

Fast and accurate de novo assembler for single molecule sequencing reads

Homepage:

https://github.com/fenderglass/Flye/

License:

BSD-3-Clause

Recipe:

/flye/meta.yaml

package flye

Versions:

2.9.2-2,  2.9.2-1,  2.9.2-0,  2.9.1-0,  2.9-1,  2.9-0,  2.8.3-1,  2.8.3-0,  2.8.2-0, 

2.9.2-2,  2.9.2-1,  2.9.2-0,  2.9.1-0,  2.9-1,  2.9-0,  2.8.3-1,  2.8.3-0,  2.8.2-0,  2.8.1-1,  2.8.1-0,  2.8-0,  2.7.1-2,  2.7.1-1,  2.7.1-0,  2.7-0,  2.6-0,  2.5-0,  2.4.2-0,  2.4.1-0,  2.4-0,  2.3.7-0,  2.3.6-3,  2.3.5-3,  2.3.4-2,  2.3.4-0,  2.3.3-0,  2.3.2-0,  2.3.1-0,  2.3-0

Depends:

• libgcc-ng >=12

• libstdcxx-ng >=12

• libzlib >=1.2.13,<1.3.0a0

• python >=3.10,<3.11.0a0

• python_abi 3.10.* *_cp310

• setuptools

Required By:

• masurca

• titanomics

• milonga

• zga

• ssuissero

• inspector

• ptgaul

• plassembler

• etoki

• athena_meta

• dragonflye

• telr

• hpsuissero

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install flye

and update with:

conda update flye

or use the docker container:

docker pull quay.io/biocontainers/flye:<tag>

(see flye/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/flye/README.html)