recipe footprint

This is a pipeline to find transcription factor footprints in ATAC-seq or DNase-seq data.

Homepage

https://ohlerlab.mdc-berlin.de/software/Reproducible_footprinting_139/

License

GPL (>= 2)

Recipe

/footprint/meta.yaml

package footprint

(downloads) docker_footprint

Versions

1.0.0-2, 1.0.0-1, 1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install footprint

and update with:

conda update footprint

or use the docker container:

docker pull quay.io/biocontainers/footprint:<tag>

(see footprint/tags for valid values for <tag>)