footprint

downloads

This is a pipeline to find transcription factor footprints in ATAC-seq or DNase-seq data.

Home https://ohlerlab.mdc-berlin.de/software/Reproducible_footprinting_139/
Versions 1.0.0
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/footprint

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install footprint

and update with:

conda update footprint

docker

A Docker container is available at https://quay.io/repository/biocontainers/footprint.