recipe fpa

Filter Pairwise Alignment filter long read mapping information to save disk space

Homepage:

https://github.com/natir/yacrd

License:

MIT / MIT

Recipe:

/fpa/meta.yaml

package fpa

versions:

0.5.1-6,  0.5.1-5,  0.5.1-4,  0.5.1-3,  0.5.1-2,  0.5.1-1,  0.5.1-0,  0.5-2,  0.5-1, 

0.5.1-6,  0.5.1-5,  0.5.1-4,  0.5.1-3,  0.5.1-2,  0.5.1-1,  0.5.1-0,  0.5-2,  0.5-1,  0.4-9,  0.4-8,  0.4-7,  0.4-6,  0.4-5,  0.4-4,  0.4-3,  0.4-2,  0.4-0,  0.3-0,  0.2-1,  0.1.1-1

depends bzip2:

>=1.0.8,<2.0a0

depends libgcc:

>=13

depends liblzma:

>=5.6.3,<6.0a0

depends libzlib:

>=1.3.1,<2.0a0

depends xz:

depends zlib:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install fpa

and update with::

   mamba update fpa

To create a new environment, run:

mamba create --name myenvname fpa

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/fpa:<tag>

(see `fpa/tags`_ for valid values for ``<tag>``)

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