-
recipe
fusion-inspector¶ FusionInspector is a component of the Trinity Cancer Transcriptome Analysis Toolkit (CTAT). FusionInspector assists in fusion transcript discovery by performing a supervised analysis of fusion predictions, attempting to recover and re-score evidence for such predictions. - https://github.com/FusionInspector/FusionInspector/wiki
- Homepage
- License
BSD-3-Clause
- Recipe
-
package
fusion-inspector¶ 
- Versions
1.3.1-1, 1.3.1-0, 1.2.0-0, 1.1.0-2, 1.1.0-1, 1.1.0-0
- Depends bzip2
>=1.0.6,<2.0a0
- Depends gmap
>=2017.11.15
- Depends htslib
>=1.9,<1.10.0a0
- Depends perl
>=5.26.2,<5.26.3.0a0
- Depends perl-db-file
- Depends perl-set-intervaltree
- Depends perl-uri
- Depends python
>=2.7,<2.8.0a0
- Depends requests
>=2.19.1
- Depends samtools
>=1.3
- Depends star
>=2.6.1b
- Depends trinity
>=2.4
- Requirements
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install fusion-inspector
and update with:
conda update fusion-inspector
or use the docker container:
docker pull quay.io/biocontainers/fusion-inspector:<tag>
(see fusion-inspector/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/fusion-inspector/README.html)