- recipe gangstr
GangSTR is a tool for genome-wide profiling tandem repeats from short reads.
- Homepage:
- License:
GPL-3.0-or-later
- Recipe:
- Links:
doi: 10.1093/nar/gkz501
- package gangstr¶
-
- Versions:
2.5.0-3
,2.5.0-2
,2.5.0-1
,2.5.0-0
- Depends:
gsl
>=2.7,<2.8.0a0
htslib
>=1.14,<1.15.0a0
libgcc-ng
>=10.3.0
libstdcxx-ng
>=10.3.0
nlopt
>=2.7.1,<2.7.2.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install gangstr
and update with:
conda update gangstr
or use the docker container:
docker pull quay.io/biocontainers/gangstr:<tag>
(see gangstr/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/gangstr/README.html)