recipe gap2seq

Gap2Seq is a tool for filling gaps between contigs in genome assemblies.

Homepage

https://www.cs.helsinki.fi/u/lmsalmel/Gap2Seq/

License

GPLv3

Recipe

/gap2seq/meta.yaml

package gap2seq

(downloads) docker_gap2seq

Versions
3.1-23.1-13.1-02.1-42.1-32.1-22.1-12.1-02.0-8

3.1-23.1-13.1-02.1-42.1-32.1-22.1-12.1-02.0-82.0-72.0-62.0-52.0-42.0-1

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install gap2seq

and update with:

conda update gap2seq

or use the docker container:

docker pull quay.io/biocontainers/gap2seq:<tag>

(see gap2seq/tags for valid values for <tag>)

Notes

Gap2Seq is only tested on Linux x86_64 by its author.

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