garnet

GarNet uses gene expression and epigenetic data to impute transcription factors (TFs) that played an important role in a biological system.

Home	https://github.com/fraenkel-lab/GarNet
Versions	0.2.17, 0.2.20, 0.4.0, 0.4.3, 0.4.5
License	MIT
Recipe	https://github.com/bioconda/bioconda-recipes/tree/master/recipes/garnet

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install garnet

and update with:

conda update garnet

A Docker container is available at https://quay.io/repository/biocontainers/garnet.

Link to this page

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