garnet

downloads

GarNet uses gene expression and epigenetic data to impute transcription factors (TFs) that played an important role in a biological system.

Home https://github.com/fraenkel-lab/GarNet
Versions 0.2.17, 0.2.20, 0.4.0, 0.4.3, 0.4.5
License MIT
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/garnet

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install garnet

and update with:

conda update garnet

docker

A Docker container is available at https://quay.io/repository/biocontainers/garnet.