-
recipe
gemini¶ a lightweight db framework for disease and population genetics.
- Homepage
- License
MIT License
- Recipe
- Links
biotools: GEMINI, doi: 10.1371/journal.pcbi.1003153
-
package
gemini¶ 
- Versions
0.30.1-0, 0.20.1-1, 0.20.1-0, 0.20.0-0, 0.20.0a0-0, 0.19.2a-2, 0.19.2a-1, 0.19.2a-0, 0.19.1-3, 0.19.1-2, 0.19.1-1, 0.19.1-0, 0.19.0-0, 0.18.3-1, 0.18.2-1, 0.18.1-3, 0.18.1-2, 0.18.1-1, 0.18.0-8, 0.18.0-7, 0.18.0-6, 0.18.0-5, 0.18.0-4, 0.18a-4, 0.17.3dev1-4, 0.17.3dev1-3, 0.17.3dev0-2, 0.17.3dev0-1
- Depends bcolz
- Depends bottle
- Depends bx-python
- Depends cyordereddict
- Depends cython
- Depends cyvcf2
>0.6.5
- Depends geneimpacts
- Depends grabix
- Depends inheritance
- Depends ipyparallel
- Depends ipython-cluster-helper
- Depends jinja2
- Depends networkx
- Depends numexpr
- Depends numpy
- Depends openpyxl
- Depends pandas
- Depends pybedtools
- Depends pysam
- Depends python
>=2.7,<2.8.0a0
- Depends python-snappy
- Depends pyyaml
- Depends scipy
- Depends snappy
>=1.1.7,<1.1.8.0a0
- Depends sqlalchemy
- Depends unidecode
- Requirements
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install gemini
and update with:
conda update gemini
or use the docker container:
docker pull quay.io/biocontainers/gemini:<tag>
(see gemini/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/gemini/README.html)