recipe genomelake

Simple and efficient random access to genomic data for deep learning models.

Homepage:

https://github.com/kundajelab/genomelake

License:

BSD / BSD License

Recipe:

/genomelake/meta.yaml

Simple and efficient random access to genomic data for deep learning models.

package genomelake

Versions:

0.1.4-5,  0.1.4-4,  0.1.4-3,  0.1.4-2,  0.1.4-1,  0.1.4-0

Depends:

• bcolz >=1.1

• libgcc-ng >=12

• numpy

• pybedtools

• pybigwig

• pysam

• python >=2.7,<2.8.0a0

• python_abi 2.7.* *_cp27mu

• six >=1.9.0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install genomelake

and update with:

conda update genomelake

or use the docker container:

docker pull quay.io/biocontainers/genomelake:<tag>

(see genomelake/tags for valid values for <tag>)

Download stats

Link to this page

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