recipe ghmm

General Hidden Markov Model library (GHMM) is a freely available C library implementing efficient data structures and algorithms for basic and extended HMMs with discrete and continous emissions

Homepage:

http://ghmm.org/

License:

GPL2

Recipe:

/ghmm/meta.yaml

package ghmm

Versions:

0.9-2,  0.9-1,  0.9-0

Depends:

• libgcc-ng >=12

• libxml2 >=2.9.14,<2.10.0a0

• perl >=5.32.1,<5.33.0a0 *_perl5

• python >=2.7,<2.8.0a0

• python_abi 2.7.* *_cp27mu

• swig

Required By:

• pymix

• sshmm

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install ghmm

and update with:

conda update ghmm

or use the docker container:

docker pull quay.io/biocontainers/ghmm:<tag>

(see ghmm/tags for valid values for <tag>)

Download stats

Link to this page

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