recipe ghostz

GHOSTZ is a highly efficient remote homologue detection tool

Homepage

http://www.bi.cs.titech.ac.jp/ghostz/

License

BSD-2-Clause

Recipe

/ghostz/meta.yaml

Links

doi: 10.1093/bioinformatics/btu780

GHOSTZ is a homology search tool which can detect remote homologues like BLAST and is about 200 times more efficient than BLAST by using database subsequence clustering. GHOSTZ outputs search results in the format similar to BLAST-tabular format.

package ghostz

(downloads) docker_ghostz

Versions

1.0.2-1,  1.0.2-0,  1.0.0-1,  1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install ghostz

and update with:

conda update ghostz

or use the docker container:

docker pull quay.io/biocontainers/ghostz:<tag>

(see ghostz/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/ghostz/README.html)