recipe gtdbtk

A toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

Homepage:

https://github.com/Ecogenomics/GTDBTk

License:

GPL3 / GNU General Public v3 (GPLv3)

Recipe:

/gtdbtk/meta.yaml

Links:

doi: 10.1093/bioinformatics/btz848

package gtdbtk

(downloads) docker_gtdbtk

Versions:
2.1.1-12.1.1-02.1.0-52.1.0-42.1.0-32.1.0-22.1.0-12.1.0-02.0.0-2

2.1.1-12.1.1-02.1.0-52.1.0-42.1.0-32.1.0-22.1.0-12.1.0-02.0.0-22.0.0-12.0.0-01.7.0-01.6.0-01.5.1-01.5.0-01.4.1-11.4.1-01.4.0-11.4.0-01.3.0-21.3.0-11.3.0-01.2.0-11.2.0-01.1.1-01.1.0-01.0.2-31.0.2-21.0.2-11.0.2-01.0.1-11.0.1-01.0.0-00.3.3-00.3.2-20.3.2-10.3.2-00.3.1-00.3.0-10.3.0-00.2.2-00.1.6-00.1.5-00.1.3-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install gtdbtk

and update with:

conda update gtdbtk

or use the docker container:

docker pull quay.io/biocontainers/gtdbtk:<tag>

(see gtdbtk/tags for valid values for <tag>)

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