recipe gubbins

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins.

Homepage

https://github.com/sanger-pathogens/gubbins

License

GPL-2.0

Recipe

/gubbins/meta.yaml

package gubbins

(downloads) docker_gubbins

Versions
2.4.1-12.4.1-02.4.0-02.3.5-02.3.4-22.3.4-12.3.4-02.3.2-02.3.1-2

2.4.1-12.4.1-02.4.0-02.3.5-02.3.4-22.3.4-12.3.4-02.3.2-02.3.1-22.3.1-12.3.1-02.2.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install gubbins

and update with:

conda update gubbins

or use the docker container:

docker pull quay.io/biocontainers/gubbins:<tag>

(see gubbins/tags for valid values for <tag>)