recipe guidemaker

GuideMaker: Software to design gRNAs pools in non-model genomes and CRISPR-Cas systems

Homepage:

https://github.com/USDA-ARS-GBRU/GuideMaker

License:

PUBLIC-DOMAIN / CC0 1.0

Recipe:

/guidemaker/meta.yaml

Links:

biotools: GuideMaker, doi: 10.5281/zenodo.4849258

package guidemaker

Versions:

0.3.4-0,  0.2.0-0

Depends:

• altair

• biopython >=1.79

• nmslib >=2.0.6

• numpy >=1.11

• onnxruntime >=1.8.1

• pandas >=1.0.0

• pdoc3

• pip

• pybedtools >=0.8.2

• pytest >=4.6

• pytest-cov

• python >=3.6

• pyyaml >=5.4.1

• regex 2020.11.13

• streamlit >=0.81.0

• streamlit_tags >=1.2.6

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install guidemaker

and update with:

conda update guidemaker

or use the docker container:

docker pull quay.io/biocontainers/guidemaker:<tag>

(see guidemaker/tags for valid values for <tag>)

Download stats

Link to this page

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