- recipe hail
Hail is Python-based data analysis tool for working with genomic data.
- Homepage:
- Developer docs:
- License:
MIT
- Recipe:
- package hail¶
- versions:
0.2.61-2,0.2.61-1,0.2.61-0,0.2.58-0,0.2.33-1,0.2.33-0- depends aiohttp:
- depends aiohttp-session:
- depends asyncinit:
- depends bokeh:
>1.1,<1.3- depends decorator:
<5- depends deprecated:
- depends dill:
- depends gcsfs:
- depends google-api-core:
- depends google-cloud-sdk:
- depends google-cloud-storage:
- depends humanize:
- depends hurry.filesize:
- depends jinja2:
<3.1- depends libcxx:
>=14.0.4- depends nest-asyncio:
- depends openjdk:
8.*- depends parsimonious:
- depends pyjwt:
- depends pyspark:
>=2.4,<2.4.2- depends python:
>=3.6,<3.7.0a0- depends python-json-logger:
0.1.11- depends python_abi:
3.6.* *_cp36m- depends requests:
- depends scipy:
- depends tabulate:
0.8.3- depends tqdm:
4.42.1- requirements:
Installation
You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).
While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.
Given that you already have a conda environment in which you want to have this package, install with:
mamba install hail and update with:: mamba update hail
To create a new environment, run:
mamba create --name myenvname hail
with
myenvnamebeing a reasonable name for the environment (see e.g. the mamba docs for details and further options).Alternatively, use the docker container:
docker pull quay.io/biocontainers/hail:<tag> (see `hail/tags`_ for valid values for ``<tag>``)
Download stats¶
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/hail/README.html)
