hapbin

downloads

hapbin is a collection of tools for efficiently calculating Extended Haplotype Homozygosity (EHH), the Integrated Haplotype Score (iHS) and the Cross Population Extended Haplotype Homozogysity (XP-EHH) statistic.

Home https://github.com/evotools/hapbin
Versions 1.0.0
License GPLv3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/hapbin

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install hapbin

and update with:

conda update hapbin

docker

A Docker container is available at https://quay.io/repository/biocontainers/hapbin.