recipe haplocheck

Detects in-sample contamination in mtDNA or WGS sequencing studies by analyzing the mitchondrial content.

Homepage:

https://github.com/genepi/haplocheck

License:

MIT

Recipe:

/haplocheck/meta.yaml

Links:

doi: 10.1101/gr.256545.119

package haplocheck

Versions:

1.3.3-0

Depends:

• openjdk >=8

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install haplocheck

and update with:

conda update haplocheck

or use the docker container:

docker pull quay.io/biocontainers/haplocheck:<tag>

(see haplocheck/tags for valid values for <tag>)

Download stats

Link to this page

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