- recipe hitac
A hierarchical taxonomic classifier for fungal ITS sequences
- Homepage:
- License:
BSD / BSD-3-Clause
- Recipe:
- Links:
biotools: hitac
HiTaC is a software for hierarchical taxonomic classification for fungal ITS sequences. It is pure python code compatible with Python 3.8+ and requires hiclass, numpy, pandas, scikit-bio and scikit-learn.
- package hitac¶
-
- Versions:
2.0.23-0
,2.0.22-0
,2.0.21-1
,2.0.21-0
,2.0.20-1
,2.0.20-0
,2.0.19-0
,2.0.16-0
,2.0.15-0
,2.0.23-0
,2.0.22-0
,2.0.21-1
,2.0.21-0
,2.0.20-1
,2.0.20-0
,2.0.19-0
,2.0.16-0
,2.0.15-0
,2.0.10-1
,2.0.10-0
,2.0.9-1
,2.0.9-0
,2.0.8-0
,2.0.6-0
,2.0.5-0
,2.0.4-0
,1.5.9-0
,1.5.8-0
,1.5.4-0
,1.5.1-0
,1.4-0
,1.3-0
,1.1-0
- Depends:
hiclass
4.1.7
numpy
>=1.22.3
pandas
>=1.4.3
python
>=3.7
scikit-bio
>=0.5
scikit-learn
>=0.24
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install hitac
and update with:
conda update hitac
or use the docker container:
docker pull quay.io/biocontainers/hitac:<tag>
(see hitac/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/hitac/README.html)